YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119112402, gi...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARWSSLGAL KVPKSTSVKL FNIAPRHLSS SYGALGRYAA SGALYHNNDR YRTKQQQPSH  60
   61 IWSTCVPPNG LLVRSFTNGD SLRRQKDPPN EQQQESVDPL ADPATPEKLG LFARFKKMYK 120
  121 EYWYVLVPVH CLTSVMWFGG FYYASTSGVD VIAILESLGV SEKLINPVRD SSLGHIAIAY 180
  181 LLYKIATPAR YTVTLGGTTV SIKYLEQWGY IKPIPSKARL VQMYKDKKEN IQEKIAEKKQ 240
  241 DFQD

Type	Start	End	Confidence
Cytoplasmic	1	121	0.81
Transmembrane Helix	122	144	0.75
Non-Cytoplasmic	145	244	0.79