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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118780676, gi...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHHTSSSTSS TTSSAVPSRS PSTASTTSSA SSASAASSYK SVERQTKYLN EHLYIKSYLD  60
   61 IEEEDRNAKL LFQKVRPGGI RNYTPKILKP PQKDAINFQH RAMALGLASV AAVAGGLAHT 120
  121 PIALLTLIPL LAVGVNYYRY QSVDPETNPT DQQTLRRYYD FVVIGAGSAG AVVASRLSEI 180
  181 GDWSVLLLEA GGDENEVTDV PSLAGYLQLT EYDWKYQTTP SADRRYCQAM IGDRCNWPRG 240
  241 KVMGGSSVLN AMVYVRGNRL DYDQWQEQGN VGWGYENVLP YFIKSEDNRN PYMARSPYHG 300
  301 VGGYLTVQEA PWRTPLSVAF VAAGQEMGYE NRDINGAEQT GFMLLQATIR RGSRCSTSKA 360
  361 FLRPVRLRKN LHIAMNAHVT RILFDDQHRA YGVEFVRHQK RQYVFARKEI ILSAGALNTP 420
  421 QILMLSGVGP ADHLDELGIP VVSDLPVGDN LQDHVGLGGL TFLVDQPVTV KTSRYSSVPV 480
  481 ALEYFLNERG PMTFPGIEGV AFVNTKYADP SGKWPDIQFH FGPSSVNSDG GQNIRKILNL 540
  541 RDGFYNTVYK PIQNAETWTI LPLLLRPKST GWVRLRSKNP FVQPSIEPNY FAHEEDVAVL 600
  601 VEGIKIAINV SYTQAFQRFN SRPHAIPLPG CRHLPFMSDA YWACTIKQFT FTIYHPAGTA 660
  661 KMGPSWDPGA VVDPRLRVYG VSGLRVVDAS IMPTIISGNP NAPVIMIGEK AADMIKEDWG 720
  721 RLVGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle