YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118781007, gi...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHYHDLILAF PLLFLSISAI SAVSWEEWWT YDGISGPAFW GLINPEWSLC NKGRRQSPVN  60
   61 LEPQRLLFDP NLRILHIDKH RISGTITNTG HSVIFTADNE TSSAYGTPQI PVNLTGGPLS 120
  121 YRYRFHEIHV HYGLHDQFGS EHSVEGYTFP AEARHIQIFG YNSQLYANFS DALYRAQGIV 180
  181 GVAILLQLGD LSNPELRMLT DQLERIRYGG DEAPVRRISV RDLLPDTEHY MTYEGSTTAP 240
  241 ACYETVTWIV MNKPIYITKQ QLHALRRLMQ GGPDHPKAPL GNNFRPPQPL LHRPVRTNID 300
  301 FRNKLEKGGK ICATMYKDVH YKGRRGWVMW GKKENIQ

Type	Start	End	Confidence
Cytoplasmic	1	6	0.43
Transmembrane Helix	7	25	0.60
Non-Cytoplasmic	26	337	0.74