YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AGAP004572-PB, A...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGADSQTKTI LCAKTPELIE TAIADRKPEQ SQTDPHHRAP TAESLAAELS QSDSTLSGVQ  60
   61 FEKALQTCSN VVHEAEVDRK LKEIGAATPI LPSEIGTDFN FKREIVWKNV VGFLLLHICG 120
  121 WVGLHLAFWR YCDYRTTLYT LWLMYASGQG VTMGAHRLWS HRAFKAKLWL RIILLWMHTL 180
  181 AGQNCLYVWV RDHRQHHKFS DTDADPHNAN RGFFFSHIGW LLSKKHPKVI EYGKKIDMSD 240
  241 LEADPLIMFQ KDHYKLLYTI FALFGPTAIP VYFWGENPWY ALFVAFFFRT VLSLNATWSV 300
  301 NSAAHMFGTR PYDKTMWPVE NMFVSFVAVG EGWHNYHHAF PWDYRASEYG TPLNLTGTLI 360
  361 DLLAKFGAVY DRKTATPNMV KNRVMRTGDK SHHTYGTDEG RSAFTTLWNI WKHPSNPTYN 420
  421 SIYTPKPKIL QSDGYALIPD ELKQSERDED ILSKENEELM RRQKEEENRT TEANQIYNKL 480
  481 SKYIKEQQQS VPESVDELLL QQSNNNVDKT GHPMQGKAAL NVVDCNDNAL VKRKVTVDAA 540
  541 SSTTSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle