YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AGAP007885-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELLIDPNI RGWVFLPIVV ITFLVGIIRH YFSILISSQK KAELTQIQDS QAMIRARLLR  60
   61 ENGKYLSQQS FAMRRHYFNN EDTGYFKTQK RAPPSPNSTA MLSDLVKGNF INVLPMIVIG 120
  121 GWINWMFSGF VTTKVPFPLT LRFKPMLQRG IELASLDAAW VSSASWYFLN VFGLRSIYTL 180
  181 VLGENNAADQ TQSMQDQMSG AAVAMPQDPK AAFKAEWEAL QITEYQNVLA NVESELLASS 240
  241 GLAGDQTGAP SLLQSSRGED SSALRN

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.61
Transmembrane Helix	12	32	0.93
Cytoplasmic	33	109	0.62
Transmembrane Helix	110	131	0.79
Non-Cytoplasmic	132	152	0.62
Transmembrane Helix	153	174	0.50
Cytoplasmic	175	266	0.53