YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116127281, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILAHRSVL VVSRMLSSRA AATQATPVAP QTDQKWDLYA GVLVERLPIV TKTLEPIEAK  60
   61 FKEMLNQIEL EKSLKSNHEL RKETEKQQLE LLKAGKIDLD SEALKQTAQD LEDAYNEEYA 120
  121 RFKPAPRVTE ADSKNDTRSL DRKLEQTLVL LVEQKLGSKS HYLLPQGLHR KGESLRETAE 180
  181 RTLKECCGDK LQVTFYGNAP VGFYKYKYPP SVRNDGAAGA VGAKVFFFRS VVKDPSRNVG 240
  241 SDQVKYQWLS QDELQKQLQQ PYYQSVSQFL L

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	271	0.99