YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116126280, gi...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDPEVDEI STDKDSGMES ATGSKDETPE RKPSTVLART TSANDYDDEP DESLGERLWG  60
   61 LTEMFPEPVR QFSGAVTDLT VRSVKGLYSL TCNVSWIFFT SSMVMLAPVV FEVERAQMEE 120
  121 MQKSQQKQVL LGPGSAVGGG GGAPGGMPAL PPMAAAR

Type	Start	End	Confidence
Cytoplasmic	1	89	0.68
Transmembrane Helix	90	111	0.69
Non-Cytoplasmic	112	128	0.68
Transmembrane Helix	129	151	0.68
Cytoplasmic	152	157	0.40