YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AGAP004657-PA, A...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYAREPCP YRIVDDCGGA FAMGCIGGGV FQAIKGFRNA PSGFNRRLLG SLTAIKSRSP  60
   61 IIAGNFAVWG GMFSTIDCTL VHFRKKEDPW NSIISGAATG GILAARNGVP AMIGSAVIGG 120
  121 VLLALIEGVG IMFTRISAEQ FRNPTPPSDD PSVLGDPNQQ QMSSSAPSTF AFGQSGQNYQ 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	16	0.66
Transmembrane Helix	17	34	0.76
Non-Cytoplasmic	35	60	0.57
Transmembrane Helix	61	81	0.79
Cytoplasmic	82	89	0.56
Transmembrane Helix	90	105	0.59
Non-Cytoplasmic	106	111	0.52
Transmembrane Helix	112	134	0.87
Cytoplasmic	135	180	0.83