YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116122920, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSQCIAVLVL AATALIAEGS VIPLALAPGY ALALPAGLTV PVLPWGWPYA GLPAAYPVAA  60
   61 WPPAAIHAAY PAYAHHGAYL AAPHAAILAA PHAPAASVAH HAGVVPGATS VTATRGAVHV 120
  121 APLPGHAVSQ QQLNLAPAPG TI

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	32	0.74
Non-Cytoplasmic	33	48	0.59
Transmembrane Helix	49	70	0.65
Cytoplasmic	71	142	0.49