YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116128007, gi...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDGVRTQDI IAGDVFFEIL EPSALEYTYR LRPAKDFGGT FGISYKSPQG KLVPAIPADA  60
   61 CSAKFENADE LEGNIALVER GHCSFLTKAI NVEAIGGAAI IVTEYDTEID DFDYYIEMVH 120
  121 DNTDRDTDIP AGFLHGKNGI IIRQTLKKMN LPYAIVNIPV NLTFIQPHMI NQPPWLPW

Type	Start	End	Confidence
Cytoplasmic	1	149	0.60
Transmembrane Helix	150	170	0.56
Non-Cytoplasmic	171	178	0.98