YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116122797, gi...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIFALLLSLA LLKRCYQCRS RSELGSCKDP FLFNATQSEN ERGVSAVPCA SGWCGKVIEG  60
   61 MGSFREDDYD MATQRMCVQR GPSDSEDRCA YTVYNYKKVY MCFCQGDLCN AANRLNVSHR 120
  121 WVSLSSGTVI FSLVFWKLYL SQISQMV

Type	Start	End	Confidence
Cytoplasmic	1	120	0.84
Transmembrane Helix	121	140	0.86
Non-Cytoplasmic	141	147	0.88