YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6760350
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRRRGRSGRR RAWRRGRPQR DGRGEAEQPG GTADRGPRRR LSSQRRWAST RATAAGDGPG  60
   61 PHRDRRLLQP AQVCDILKGV ILVICYFMMH YVDYSMMYHL IRGQSVIKLY IIYNMLEVRA 120
  121 LLTPHRPGRA LSFKSSVLKV PESQECSTDS SYGASGLYCA VITWGLFLNM DSDLGDLGWV 180
  181 WRICISRAVG LMLLVWDTPL GQACRHGMSS CRLGRFLLPR HFRTSTPLSI QNCQVLGKLV 240
  241 SQLHLETHAR TLNYEVNVMI MYMFAVRNTH FKCTFKFRSL HRVNKYKFPI FVSNVFSTIC 300
  301 LTSKHSAYEN LHLYKNKLAD IHSLYKKMLR FISQIFTSFL NSKLP

Type	Start	End	Confidence
Cytoplasmic	1	73	0.68
Transmembrane Helix	74	90	0.59
Non-Cytoplasmic	91	345	0.57