YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118792315, gi...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSLFLEYCSN STVHGIKYFG CKRRTLFEKI WWIATFLLSV YGCGRLIQNI YRKWEQTPVI  60
   61 VSFAEKSTPV WQIPFPAVTI CPETKARSEY LNFSQVYFQM NDTWRDEMAN ETYDRFRAVA 120
  121 QVCDAHILRG VSLNQTTDPA CVDLLKNVSM PLESALFFCK WRNDAGLCSE FFTETITEEG 180
  181 ICFTFNSQSA GEMLRLDELH SDYEYISEKR QSPLWSLEKG YAENTDLDTY PVRVLGAGAR 240
  241 AGLYVLLNLY ERDTDFICRG PVQGFKILLH TSSEYPQVSK QYYRVPLHQE VIISVKPQMI 300
  301 TTSDGLRDYT PERRQCFFNH ERHLKYFKVY TQQNCELECT TNYTLRKCGC VKFSMPRDDR 360
  361 TEVCGASKID CYNDAEDELL EEDVKFIVDK SRDYRAKCNC LPACTSVQYD AEISQADLDW 420
  421 KSLFSAFRQS LGEQDGAQFA RLTIYFKEAQ FITSKRSELY GVTDFLANCG GLLGLFMGVS 480
  481 LLSLAELIYF CSIRPFTILR AYRAKRRESN VFFDAPPPIV EKPKDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle