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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118790718, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGVRYKISSG NIDNVFAIRN ATGALYVAKA LDYEKIKKYE LRLKASDNFK ENYTTVLINV  60
   61 RDVNDNPPVF EKSSYRTQIT EEDNRGLPKR VLRVTASDAD VDRLNNIIYF LTGPGIDIEN 120
  121 PSDSNFDINK ATGEIFVLKP LNRDPPHGRA SWKFTVFAQD EGGEGLVGFT EVQINLKDVN 180
  181 DNAPQFPNGI AYGNVTENGT IGMHVMTIKA EDYDDINEGT NAKIIYSIEK NVIQEDTGLP 240
  241 IFDINPDTGL ITTAVCCLDR EKTPDYSLQI VATDGGGLKG TGTASIKVKD LNDMPPRFTK 300
  301 DEWFVEVEET DGSVLPEAPI LTVTVNDDDE INNFQYKIIE SSGYGADKFA MVKNADGTGS 360
  361 LKVVQPLDYE DPMQINGFRF RIQVIDNNEI DESDKYHVDH SWVIVKLKDI NDNTPRFKKP 420
  421 HIETAVYENA DVRKNLGTFK AVDIDKGGKS KITYSINRAT DRKRQFAIDQ EGKVTIQREL 480
  481 DREAMAKHSL EILATDDGVP PRTASAILTV LVKDINDNAP VFAEDYRPIL LENSPPSKII 540
  541 EISAVDKDDR LEGNGAPFQF RMDPDADDVI RTSFKVEQSN KGDGMAIISS LGSFDREYRK 600
  601 QYTIPIVIKD SGTPPQTGTS TLTITIGDLN DNIMQPGSKE VIVYNYQGQA PDTLIGRVFV 660
  661 NDLDDWDTSD KLFYWDEAEN PRFKLDDTSG MVTMRHGARE GRYKLRFKIY DRKHAQESYA 720
  721 NMSVVVKHIS YEAIVNSGSI RLTGITDEDF IRIGNYRTQN IFRSKLERFR DKLAELLNVD 780
  781 VKNVDVFSVQ MKDRSVPLID VRFAVHGAYF YKAVQLNGVI LLHKEEIEQE VGINITMVNV 840
  841 DECLLENADC AGSCTSIIEV QSNPCLVNTN KTALVGVQIN STAECVCSSR EYKQQQTCKS 900
  901 HPCLNGGRCT DSKSGIKCSC PPGYTGPRCQ QVVRSFRGSG WAWYPPLDMC DKSHISVEII 960
  961 TTKPDGLIFY NGPITPPKED DTSKQLSDFI ALELEQGYPR LLIDYGSGTL ELRIATKHPL1020
 1021 NDGEWHRIDL FWDTEQVKIV VDFCKTAEIT ETDDGNLVEF VDHTCQALGK VPQFNEYLNL1080
 1081 NTPLQIGGVF RDKFDYTYSR WQYMPVGVGF EGCIRNFKHN GILYDLSHPG LSKGSAPGCL1140
 1141 YTQEVCDLNP QVARCLEHGK CVGSYVEAKC ECNPGWTGTY CSLPTTPTTF KTHSYVKYAL1200
 1201 SFEPDKFTTQ IQLRFRTRET YGELFRISDQ HMREYGIIEL KGAKVYFRYS LNTGQVEEQE1260
 1261 VALTAVEVDD GQWHVVKVQR YGSAAILELD GGEGANFNQS FSFDGHQWLS VDKQEGVYAG1320
 1321 GKPEFTGVKT YDVKSDYQKS CIDDIRLDGK SLPLPPATNG TQWGQATMAK NIDRYCSSNN1380
 1381 PCQNAYCPDP FECVDLWNKY ECACGDGMII SPEGKTCIDR NECLDYPCLN GGTCINQEPR1440
 1441 LKYKCICPDS YWGESCEFLK ERQALKFSTS ALAAVIACLL LIIIFLFVYF SCSRRRSANF1500
 1501 KKKPVTKDDI RENIINYCDE GGGENDMTAF DMKTLKIPIG PLPELVQHKV PVRPDIAVVS1560
 1561 DQDVFLDDPK RRADIFPASG PFDDLRNYTF EGNGSTSGSP SQV

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