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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118794093, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLTLVSCFF PRNPSWWRRR TALEKVLTLI SVVCGVAVVA LIISLLTVVL TDRIQTQPLT  60
   61 AGRRGKALNK HPNTVVDSGK SAENICLTPG CIHSASKALE QMDQEVEPCD DFYNYACGKF 120
  121 VKETVIPDEK VSVNTFSVIG DRLQQQLRSL VSEEISDSEA TPFKLAKNLY KLCMNKTRIE 180
  181 EKGIKPLLDI HEVLGGWPVL KGDSWDLDSS WSWVKSVKDF RNNGYSTDYF FDFSIGSDLK 240
  241 NSTRRIIDTD QASLGISREY LVKGMENPIV SAYYNYMVDM AVLLGADEER AKRELLDSLN 300
  301 FEMALANISL PNEKRRNATA LYNPMTVKEF QQRYPYTDWL EYFNAILKDT GIVIGEEEVI 360
  361 IVSVPTFMEQ LGPLLQNTPK RVMANYVMWR ISGFSSFFLT EKLRKRQLQY STALSGKQEQ 420
  421 EPRWKECVDI TSGSLPISVG ALYIRKYFRE DSKRAALDMV NDIKSVFVDI LKKVDWMDEV 480
  481 TRVSALEKVS TMATHIGYPD ELMDDAKIAE YYKDLEFQPD STYLNTILYM NKFGTTKAFK 540
  541 KLRIAVNKTD WITHSRPAIV NAFYSSIENS IQFPAGILQG QFFSYDRPKY MNYGAIGFVI 600
  601 GHEITHGFDD QGRQFDKNGN LVDWWQSDTK TAYLEKARCI IEQYGNYTEP NVKLNLNGIN 660
  661 TQGENIADNG GIKEAYYAYR RWTEKNGPEQ RLPGLNLSPE QMFWLSAAQT WCSVYRPETM 720
  721 KMRITTGVHS PGQFRVLGPM SNMHEFAKDF NCPVGSPMNP EHKCEVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle