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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|239630370, gi...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKQNGLFS STLTYIIIFV LLVTGFAYYM RDNGTTSSQE IETSTFLSEL KKDNVKSYSL  60
   61 QPSGGVYKVS GEYKKAQKSS SSNNSLSLFG SQSTKVTKFS TYIPTNDATL SQIQKATSAN 120
  121 NVKTDTQEES QSGVWFSLLI TVVPIVIMMV FFYMMMNQAG QGGGSGRVMS FGKSRAKQAD 180
  181 KNANKVRFSD VAGAEEEKQE LVEVVEFLKD PRKFSALGAR IPAGVLLEGP PGTGKTLLAK 240
  241 AVAGEAGVPF FSISGSDFVE MFVGVGASRV RDLFDQAKKA APSIIFIDEI DAVGRQRGAG 300
  301 MGGGHDEREQ TLNQLLVEMD GFTGNEGVIV IAATNRSDVL DPALLRPGRF DRKILVGRPD 360
  361 VKGREAILKV HAKNKPLAPS VDLKEVARQT PGFVGADLEN LLNEAALVAA RRSKKAIDAS 420
  421 DVDEAEDRVI AGPAKRDRVI NPKERNMVAF HEAGHAIVGL VLSDSRTVRK VTIIPRGRAG 480
  481 GYAIMLPKDD QFLLTKKELT EQIVGLLGGR TAEEIIFGVE STGASNDFEQ ATQIARSMVT 540
  541 QYGMSDRLGT VQLETEGQPF LGAQYGQTPP YSETTATAID DEIRRIIDDA HKQAHEIIEA 600
  601 HREQHKLIAE ALLKYETLNE KEILSLFNDG KMPARDQDEF PSEKAATFEQ SKAALEHKDK 660
  661 EKQADEEASG KTDSPQSGDQ QASDDDTDSD EVEKPDDTST DNSSSNNDDQ QGPQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle