YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116108080, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLTNETTM RIRALERTDL RNIHIINNKA ETMRLWFEEP YESLDELTSL YDKHIHDNTE  60
   61 RRFVIEDNDT FVGIVELMSI DYIHRTCEIQ IIIIGGFSGK GYAQKALKTG VDYAFNTLNM 120
  121 HKVYLWVDID NAPAVHIYKK LGFKIEGTIK EQFFAGGKYH DSYFMGILKS EYAQKEKTLR 180
  181 NKKTGKIPVF LFLSVFSYLF SFSFEHVSWL AS

Type	Start	End	Confidence
Cytoplasmic	1	186	0.95
Transmembrane Helix	187	207	0.86
Non-Cytoplasmic	208	212	0.81