YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10438245
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSGWRGVL SSSPPFRLRS AKFSGIALED LRRALKTRLQ MVCVFVMNRM NSQNSGFTQR  60
   61 RRMALGIVIL LLVDVIWVAS SELTSYVFTQ YNKPFFSTFA KTSMFVLYLL GFIIWKPWRQ 120
  121 QCTRGLRGKH AAFFADAEGY FAACTTDTTM NSSLSEPLYV PVKFHDLPSE KPESTNIDTE 180
  181 KTPKKSRVRF SNIMEIRQLP SSHALEAKLS RMSYPVKEQE SILKTVGKLT ATQVAKISFF 240
  241 FALW

Type	Start	End	Confidence
Cytoplasmic	1	62	0.98
Transmembrane Helix	63	81	0.91
Non-Cytoplasmic	82	96	0.75
Transmembrane Helix	97	118	0.88
Cytoplasmic	119	244	0.96