YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190689449, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVVVAAAG GAGPAVLQVA GLYRGLCAVR SRALGLGLVS PAQLRVFPVR PGSGRPEGGA  60
   61 DGSGVGAEAE LQANPFYDRY RDKIQLLRRS DPAAFESRLE KRSEFRKQPV GHSRQGDFIK 120
  121 CVEQKTDALG KQSVNRGFTK DKTLSSIFNI EMVKEKTAEE IKQIWQQYFA AKDTVYAVIP 180
  181 AEKFDLIWNR AQSCPTFLCA LPRREGYEFF VGQWTGTELH FTALINIQTR GEAAASQLIL 240
  241 YHYPELKEEK GIVLMTAEMD STFLNVAEAQ CIANQVQLFY ATDRKETYGL VETFNLRPNE 300
  301 FKYMSVIAEL EQSGLGAELK CAQNQNKT

Type	Start	End	Confidence
Signal Peptide	1	18	0.88
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	328	0.98