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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116515800, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTTILSLT TAAVILAAYV PNEPILADTP SSEVIKETKV GSIIQQNNIK YKVLTVEGNI  60
   61 GTVQVGNGVT PVEFEAGQDG KPFTIPTKIT VGDKVFTVTE VASQAFSYYP DETGRIVYYP 120
  121 SSITIPSSIK KIQKKGFHGS KAKTIIFDKG SQLEKIEDRA FDFSELEEIE LPASLEYIGT 180
  181 SAFSFSQKLK KLTFSSSSKL ELISHEAFAN LSNLEKLTLP KSVKTLGSNL FRLTTSLKHV 240
  241 DVEEGNESFA SVDGVLFSKD KTQLIYYPSQ KNDESYKTPK ETKELASYSF NKNSYLKKLE 300
  301 LNEGLEKIGT FAFADAIKLE EISLPNSLET IERLAFYGNL ELKELILPDN VKNFGKHVMN 360
  361 GLPKFLTLSG NNINSLPSFF LSGVLDSLKE IHIKNKSTEF SVKKDTFAIP ETVKFYVTSE 420
  421 HIKDVLKSNL STSNDIIVEK VDNIKQETDV AKPKKNSNQG VVGWVKDKGL WYYLNESGSM 480
  481 ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM 540
  541 ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM 600
  601 ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKVSGK WYYTYNSGDL 660
  661 LVNTTTPDGY RVNANGEWVG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle