YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116095687, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFNKLFHT NKASPKNTLS STMSFFFGSS MAGQNVTERT AMQNTAVYAC VRVLAEGLAE  60
   61 LPLHIYQYTS DGGKRRAINH PLYFLLHDAP NPEMTSFIFR ETMMNHLLLW GNAYAQIIRN 120
  121 GQGKITGLYP LMPDRMDVNR AANGEIYYTY TRNYDDYQAK NKSKQVILLS DEVLHIAGLG 180
  181 FDGLIGYSPI AMAKNAIGLS MAAEQYGATF FKNDATPGGV LEHPNVVKDP ERLRKSWQSQ 240
  241 FSGSNNHSIA VLEEGMTFHQ LSIPPDQAQF LDTRKFQLDE IARIFRVPPH MVGDLDRSTF 300
  301 SNIEQQSLEF VKYTLNPWCI RWEQAMNQQL LSADDQRKFF VKFNVDGLLR GDYESRMNGY 360
  361 AIGRQNGWLS ANDIRELEDL NRIPTNEGSD EYLVNGNMLP LNQAGNFYSS QPSKESEEPK 420
  421 E

Type	Start	End	Confidence
Signal Peptide	1	32	0.95
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	421	0.99