YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116058770
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVVTSRAL DAYVASTRVP RAHTRATSTT SLAGPTHRRS SARARGMRPS TTRRCRASTT  60
   61 EASRPGARDD AGDLVRTRAR CRAVTNALVF SCMGAAYGTA KSGVGIASMG VMRPELVMKS 120
  121 ILPVVFSGIL GIYGLIIAVV ISSGINPKSY TLFQGYAHLG SGLACGLSGL SAGMCIGIVG 180
  181 DAGVRANAQQ PKLFVGLVLI LIFAEALALY GMIVGIILSS SASGAA

Type	Start	End	Confidence
Cytoplasmic	1	120	0.83
Transmembrane Helix	121	145	0.86
Non-Cytoplasmic	146	156	0.60
Transmembrane Helix	157	180	0.88
Cytoplasmic	181	192	0.56
Transmembrane Helix	193	218	0.87
Non-Cytoplasmic	219	226	0.59