YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116055835
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATELAAMAM ETGTTSLPEN FCIIEGRNSV VDFADMQAGE IAQNIESRRQ RVFLLMEELR  60
   61 RLRVQQRVKT IGLEDDETVE PREFVSVIPG FPVLTEDSVK DYRIYWGAAV AMLLLFGGLI 120
  121 APMAEVKLGL GGTSYAEFID GLHLPAQLAQ VDPIVASFTG GAVGAISAFF VIEIENVKEQ 180
  181 RKKICMYCKG SGYLQCAECS MSKRPGRLID PTSGSRCICP TCSGTAKVMC TSCLCTGMAL 240
  241 ATEHDPRIDP FD

Type	Start	End	Confidence
Cytoplasmic	1	103	0.99
Transmembrane Helix	104	124	0.93
Non-Cytoplasmic	125	152	0.91
Transmembrane Helix	153	172	0.95
Cytoplasmic	173	252	0.95