YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115607132
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYIHASLSSL TLTAARMATP ASAPDTRALV ADFVGYKLRQ KGYVCGAGPG EGPAADPLHQ  60
   61 AMRAAGDEFE TRFRRTFSDL AAQLHVTPGS AQQRFTQVSD ELFQGGPNWG RLVAFFVFGA 120
  121 ALCAESVNKE MEPLVGQVQE WMVAYLETRL ADWIHSSGGW AEFTALYGDG ALEEARRLRE 180
  181 GNWASVRTVL TGAVALGALV TVGAFFASK

Type	Start	End	Confidence
Cytoplasmic	1	185	0.87
Transmembrane Helix	186	207	0.93
Non-Cytoplasmic	208	209	0.83