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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116000813
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYYRALAF ALAGARRYGR DGYEAADLEP LREVQNLVGT AFVVTGGSRG IGFAVSEGLI  60
   61 RRGARVHVVC RDEATGASAR ERLNALGTRT GGSCEVHVSD LSSLAQTRGL VEKLASRGEA 120
  121 LHGLVCNAGV MRRERTTSSE GYEXXXXXXX DGASRGPQKG PRVTPDASRG LILKSAPAEL 180
  181 DGDAVPTSTS TPGRATSSAR RLAWGLARGI DALGAFARAG GRSSTGGGGS ATRKVRCASA 240
  241 RAIGEAKRSR GGMEMRAFQV VVAATVDGGI GKDNGLPWKL TKDMGHFKKL TSETRDANAV 300
  301 NAVVMGRKTW ESIPAKFRPL PGRLNVVLSR SGVLAEANDE NNNGAETLPE GVLVRKTIDD 360
  361 ALSAISSSEK RVEKTFVIGG AQIYEEALKS ERCEAVHLTE VEGDFECDVF IPKIDADKFK 420
  421 LYGQSKPITE NGARYQFLTY VTKDSESGKF RPIAGELLPA GCDVKHEEHQ YLDMIREIID 480
  481 QGAVKGDRTG TGTISTFGNQ MRFDLRRSFP LLTTKRVFWR GVAEELLWFV AGETNANKLA 540
  541 EKKINIWDGN GSREYLDSIG LTEREVGDLG PVYGFQWRHF GAEYTNMHAD YTGKGVDQLA 600
  601 EVINKIKNNP TDRRILLTAW NPAALKEMAL PPCHMFCQFY VANGELSCQM YQRSCDMGLG 660
  661 VPFNIASYSL LTCMIAQVCD LKPGDFVHVC GDTHVYSNHV EPLKKQLTCE PRPFPILKIN 720
  721 PEKKDIDSFT FDDFEIIGYD PHPKIEMKMA V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle