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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115961786, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHRRGAADW FQYHFCTVTV ALERLDSLCG QQIKICRNTS TSGDRPGRTG TTFSLIMKSF  60
   61 LVAIMILAFA QGCTSSEAEE RLFTKLFYKY NRLIRPVENN SEVLDVNFRL TMSQLIDVDE 120
  121 KNQIMTTNVW LKQLWMDYKL QWNPAEYDNI SILRVPSKMI WTPDLVLYNN ADGNYEVTLM 180
  181 AKALVYSDGT VYWLPPAIYK SSCKINVRYF PFDEQFCPMK FGSWTYDGSL IDLIPSSNDV 240
  241 DLEDYWQSGE WDIIGTPANK NTLKYPCCDE IYTDITFTLH IRRKPLFYTV NLILPCVLIS 300
  301 FLTVLVFYLP SDSGEKITLC ISVLLALTVF LLLIAEIIPP TSLLIPLIGR YLLFTMVLVT 360
  361 LSIVITVIVL NIHYRAPSTH TMRPWVRKVF LEVLPPLLYM KRPKRYNHGE NPNKEKDLNY 420
  421 FELKEVVHKE GENPHSNGRD IFDNLHPSFK LRTLSDDVGN PNIDAPSMSK GGGRYSKEFK 480
  481 QAVDGVKFIA QHLKSEDEFN SVTEDWKYVA MVIDRIFLWI FLICVICGTS GIILSAPLIF 540
  541 EPVVTQIERD EAAMTAAPTM SATTDLPITD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle