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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115910731
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKMYIVFGL LAVSVLPYTS AQNTYDIYPI SLSRNSETEI SSPNYPSNYG DNLNILWRVQ  60
   61 APENSGVVAT FNDVSLEYYY DNLIVGFGSG PDGPGSGVLA RFTGTNFTSE VRSPGDTMWI 120
  121 LFTSDVSKTN RGFDARLTAV DLPVCQGDEF QCRSGLCISS SQICDGFNDC LDFSDEDSCP 180
  181 ICEPVQLEVC REKLAYNTTL FPHRLALNAQ DAERNFTEIV SSISSCHDNL LSLTCNLLYP 240
  241 ECTHNGPAQR VCYSDCVAIT DACQDPFEQS LNRPWPFECS QLTDDYAGEG MCFAAEGDLL 300
  301 DTSICGTRPA YSLGQSRVVG GINARPGEFP WIGSLRVDEG SDRGTFACGA TLISSQWVLT 360
  361 AAHCVQYYLD RVIFGILRLS GESEYEVNAE VADIIIHPDY DGETLDADIA LLRLTEPVSF 420
  421 TDYVRPACLA SSSNELSDYR RCLVAGWGAI SEGGDPSETL QKAVVNLLDQ ERCNSDVSYN 480
  481 GTLTDNMICA GYERGIIDTC QGDSGGPLTC EGDDGRWHLV GATSFGDGCA RPLFPGVYTR 540
  541 ISQFQDFITA VVSNAYSPGI YEVDLDNGVP TSIASPNYPM NYDTNDVIVW KISAPVGRSV 600
  601 RLDVVELFLE SNYDYLYVGD GLFPQSSTEL ARMTSYVVSR SVTSLGRHMW MRFVSDYLYT 660
  661 DAGFEVEVNS VDPIDDNPVI SVMANMHTNT VQISSPNYPA NYPANFYDIW RIVAPTNYTV 720
  721 LALIFDIDLG SEDGTLIEIG YGTSPHWQTI LQPVMHSLTA DDDIVGFVVS PINSLWIRFQ 780
  781 TGNQTSGRGF AMYALAERIA DLNECERDPC RNGGTCMDLI DGYQCSCLDG YKGKDCTQDN 840
  841 DECRYENPCY NGGSCNNDFG NFSCECPEGY TGSLCEINID DNPVISVMAN MHTNTVQISS 900
  901 PNYPANYPAN FYDIWRIVAP TNYTVLALIF DIDLGSEDGT LIEIGYGTSP HWQTILQPVM 960
  961 HSLTADDDIV GFVVSPINSL WIRFQTGNQT SGRGFAMYAL AERIADLNEC ERDPCRNGGT1020
 1021 CMDLIDGYQC SCLDGYKGKD CTQEISITSL EREQSSRFVL HTIQLQPQTA YRNNEFYKFL1080
 1081 SLQEQCEVQH SFAVHGGQIM EFTVAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle