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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115764748, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIHVRLLLS GYSGIRCETD INECASIPCA NGGSCRDGIN QYVCSCTTNF QGPRCRIGRN  60
   61 ITLTTTPTTA TLTFDWPAQP GVTRYGISLQ TIDGSSTPPT QTLPGSQTSA TFTGLEPGKT 120
  121 YRVTLETTAD GVDYPLSEDF GTTILQVDSC ILSSTSCLNG ATCINTQDGF ICLCLPGYTG 180
  181 TQCENNINEC GSNPCRNGGT CFDQVNQFQC QCQPGYAGTK GQTNINECAS GPCRNGATCN 240
  241 DFVNFYTCDC APGWTGTHCE NDVDECASFP CLNGAICSNQ ENQFVCTCVL GWTGINCQID 300
  301 IDECASDPCQ NGALCSDLIN RYECQCLPGW TGVNCNIEID ECSSGPCQNG AVCNDQLNSF 360
  361 TCVCAPGYTG TFCTEDINEC SSNPCQNGGL CNDLLNRYTC VCIPGYTGVN CQIDIDECAS 420
  421 RPCQNQGQCL DLIDAYVCSC VSGWAGIHCE TNIDECASAP CRNGGSCEDM VNGYTCTCAP 480
  481 GWTGIHCSVD INECTSNPCL NGICSNANNK YFCTCNPGWT GVNCETDIDE CASFPCGNGG 540
  541 ICDDGINGYI CTCGPGWTGT NCFVDIDECV SNPCLNGATC NNLQNRYTCS CAGGFTGNSC 600
  601 ETNINECTSA PCLNGGVCLD GINQYTCDCD AGWNGINCEI EINECSSRPC QNGGTCVDGT 660
  661 NSFTCDCASG WTGTLCELDI DECGSGPCQN GGVCTQGIDY YVCTCQPGWN GYNCETDRQE 720
  721 CNSDPCQNGG TCFDGVDGYS MQCVTGFTGT HCETDINECA SNPCMNGATC LNEVNQYSCR 780
  781 CAPGYEGNNC QFDTNECASN PCLNGATCND RVNLFTCTCQ PGYTGVRCEQ DIPECNSGPC 840
  841 QNGANCVDLV NDFTCVCVAG FTGLRCEFEI DECASSPCLN GGACNNGINQ YTCDCRSGFE 900
  901 GTNCETDIDE CASGPCLNGG ICTDQIDLYT CECASGWTGI NCQLDIDECA SNPCLNGAQC 960
  961 VDNVDNFDCV CTSGWEGTFC ELGTNECGSN PCANGGRCFD LFDSFTCQCV PGYTGVTCET1020
 1021 DINECGSNPC QNGGICSQSV DYYSCVCPAG YMGVNCETDI NECASNPCRN GGNCADLVNG1080
 1081 YECTCQVGWL GTNCDIGADD CALSPCVNGA ICLDGDNDFT CACLAGFEGD LCEIDVDECA1140
 1141 SNPCQTDAIC LDGINRYTCT CAPGWTGYNC DEDINECASN PCINGGECNN MQNAFSCNCT1200
 1201 AGWTGVTCET DVNECASTPC FNSGICTNGR NVYTCTCQPG WSGTNCETNI DECQSVPCQN1260
 1261 GGQCIDFENR YQCTCMAGWI GINCEIGVNE CFSNPCVNGI CVDMEDGFEC RCDLGYNGTL1320
 1321 CENNIDECAS DPCVNDGTCV DGLNSFTCVC VEGWTGRLCS TDVNECGSNP CLNGAVCLNE1380
 1381 IYIDECGSLP CMNGGLCFND GNDGYTCECT PGYNGIHCEN EILECASNPC LNGATCVEGL1440
 1441 NSISCLCQPG YAGFLCGTNI DECESYPCEN GGACRDGVNG FTCSCPTGYS GDRCEINLNE1500
 1501 CASNPCDNLG TCVNRVESHG YDCFCQPGFT GTHCEINIDE CANQPCLNGG ICNDLANGYR1560
 1561 CTCPMGWAGD NCEQSIGCRV NYTLAVGTKL EIHSPNYPSN YGNMENCRWF IQGINGRQVT1620
 1621 VEIKDYITEN RYDEFRLGVG SNPNDEGSRR MTLSGPGPFS TRTMTLQANN IWTTFITDNE1680
 1681 KTERGFSIEI TDSAYVAITP CDAEPCINGG TCENVGNTRF TCSCTSLWTG QQCEEPAEMN1740
 1741 KCAFHPCTNG AECTNIGLDY TCTCPVGFTG KNCSMQIDEC ASNPCQNGGT CQDLIGAYVC1800
 1801 ICANCFSGVN CDQAPVTDSG IKNVCENSGE CSFYDGYFTC TCQDGYSGDY CEKVTLSCVH1860
 1861 ANPCQNGALC TYIDESYLCS CPSGITGEFC ETNIDNCDPY PCANNGVCED GIDFFTCYCP1920
 1921 SGFSGDLCEI DIDECSSNPC QNGGTCLNGI NKFFCQCPES LDQPVCASVV VNQAAQSGDT1980
 1981 FLGAEINLNP WYILLIVALA LIAIFFLLLF ISSAACRKNK SALYDAELAK KERERGVPNS2040
 2041 QLHDTLPIFD DERPLSRDND YGFLPPNAVE SNVREVNSYE NPWPQSTDEM QKTHL

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