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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115730804, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSGRQYKL RVVAVLMVFS ILVMSVHGRP SDNPTEADDN YDPLKPDVPP DEQTSAAGAY  60
   61 GGDMMLSPDQ MAAFLGSQVP DDVYGSRREK RKATTNLVKR WPQNTIPYVI EETSSNDSDV 120
  121 IRNALLHWEE ETCLQFVPYT LNVSNQLGHH QHISFFKGSD CWSFVGKTGN NGAQKISIGP 180
  181 KCARLGTIAH EIGHSIGFFH EQSRPDRDDY VVVNWDNVQP DVLGNYKKRT PDLVFSNVSY 240
  241 DLKSIMHYGA YSFAVNKSLP TMMTVNPLFM RYIGQRKGLS FLDAKTANTI YDCSSGCPSL 300
  301 DCSNEGYVGP NCTCVCPEEF TGPQCLDTNP DYEPPCEFVL TSPSGYIESP NFGNGNYPAN 360
  361 IICVYHIKPT VTKPNVRITL TFDAFSLEVS NDCKWDYVRV FNKHLTYGGQ VFCGSTLPEP 420
  421 ITSIGPEMVI WFRSDIIKTM PGFRANYRIE VVPPTTTRHS TEPTVTPKLP TETAIATKPV 480
  481 TEPVVTIKPI TEPAITTKPP TEPVVTTKPL TEPVVTTKPF TELAVTTKPL TEPVVTTIPL 540
  541 TEPAVTTNPL TQPDVTTKPL TKPDVTTKPL TGPVVTTKPL AEPVVTTIPL TEPAVTTRTS 600
  601 YRTGFVTTKP LTEPAVTTKP LTEPVVTTKL LTEPAVTTKP LTKPAVTTKP LTKPAVTTKP 660
  661 LTEPAVTTKP TEPAATTKPT PLPPTTAKPS TEPAVTTKST TVPPATTKLT TDPPISTLPP 720
  721 VSTKNNTEPG VTTKPTTVPP ATTKPTTEPA VTSKTTTVPT VTTKSTTEPH VTTKATTEPT 780
  781 VTTKPTTDPV ITTTPTTEPA VTTKTTTAPP VTTKSTTEPP VTTKTTTEPA VTSKTTTVPA 840
  841 DTSKPTTEPA VTTAASSEFL ETFTGSSGVL KSPNYPNKYP KNCKRTYTIV VPAGQRIVLE 900
  901 FKDFQIESDD GDFSDSTTCS FDYVEFYLGH DIRRPMRLCG NRAPEASLVS LANTMTLEFV 960
  961 SDGSVEKRGF SASYHTIDDS LPGVWVLDVG NHTNSASVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle