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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115956715, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPCKLRFA QKILPGAFVR RCLSTSSPAS GQMTVRDALN SALDEEIARD EKVLLMGEEV  60
   61 ALYDGAYKVS KGLHAKYGDK RVIDTPITEM GFAGIATGAA MAGLRPVCEF MTFNFAMQAI 120
  121 DQVINSAGKT FYMSAGAVPV PIVFRGPNGA AMGVAAQHSQ CFAAWYGHVP GLKVISPFSS 180
  181 EDCKGLLKAA IRDDNPVVFL ENELLYGRPF EMSEEAMQDD FVLPIGKAKI EKEGSHVTLV 240
  241 AHSMGVLRSL EAAQILAEDG ISCEVINLRT IRPMDEAAIF NSVKKTNHLV TVEGGWPQFG 300
  301 VGAEIIAKVM ESDAFDYLDA PVVRVTGADV PMPYAASLEQ ASLPQVSNIV NSVKRILNVH 360
  361 IKTIACHVCL LWCKPQDVCN STPEDILIAT QISVDAVDQP VTNRDVKSQS ISAQSTHMSM 420
  421 SHYLGLPYQD HNYGQPPPPT PPQSPPPTLD AIPVLPLATI YENANPSFTP PEDNAEVQNN 480
  481 EGDTRCICTF DHDDGYMICC DKCTVWQHVE CMGLDRNNIP DVYFCERCEP RMVDQQKALE 540
  541 LQTIKRKHIL ERLDSSDDDS KRKGKRARYS SISNTPTSLT LTSTKGKNKM KKKKKKKEKE 600
  601 KGKEKVKEEE KDQRQEKHHK KKKKKKQFDL TLSSQRKHRK NRGRPEPGIG DLLLHGEQIL 660
  661 ENSDHFVEAT ENQYSLELNQ YLSDQRQNAM WTMPSLGCIM DDLSPQKIKL GAAGRTARGL 720
  721 VATEELAPNQ PIVEYRGMLM LRDQFVPANG WTKKPYLHVL MYTKFSNIEL CVDARKYGNI 780
  781 ARYVRKSCSP NAEVRHVAID GLLRLYLFSL VEITKGSEVT VAFDYSYKDC THPVKCACSK 840
  841 KNCPVKRYWR KRRSLEARNQ KKPVTNVAET AEPSNRTVSP LLVSLPAANG PEKQIEETIE 900
  901 HKDVPKVGQE EKPPTTISIS HHKSRSNRNS TEKPTKEVVA ADPSSDNEHK DKVDVEAVDP 960
  961 LPLPQDPGTG EDVNTESSEP KEDSAKSRSK MTREERKMEA IMKAFAKMEK AQERRQQALE1020
 1021 RIAHSKPEDD DMVGQEDKDQ SNKSDQQQQS SLSGKKETNE VTKSDSGKDE QFKRCNNQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle