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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115945892, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNSRKLRCI SVGASWNGFA GDSGKYTKML AHRSAWLARR ARRPHTFCRP MRSRNRFGSN  60
   61 SSGSKPLGDK ERYDVIVVGG GHAGCEAAGV SARMGAQTLL LTHKIETIGV MSCNPSFGGI 120
  121 GKGHLMREID ALDGISARLC DKAGIQYKVL NRRKGPAVWG LRAQIDRDQY QSYMQDEILN 180
  181 TPNLTVRAAP VEDLIIQGED AAEMDGCHGD KPVCSGVVLE NGETIRSSAV VITTGTFLRG 240
  241 EIHLGVERRP AGRIGDEPSV GLAKRIEDAG FTLGRLKTGT PPRLDGRTID YSELTPNHGD 300
  301 MPPIPFSFMT DRVAIQPEDQ VICHLTHSNH EVHRICIDNQ HLNVHVQEEA NGPRYETFIL 360
  361 KAILVLPNRL HGIPDRPKGL NTDIVYMQGF SVTLPPDLQE KCVNSIKGLE NATMTKPGYG 420
  421 VEYDYVDPRE IKPSLETLKI PRLFFAGQIN GTTGYEEAAA QGIIAGINAV LKARRRPPFT 480
  481 ISRTEGYIGV LIDDLTTRGT SEPYRMFTSR TEFRMTLRPD NADLRLTHRG FAAGCVSQER 540
  541 FEHTMETRKA LEESKSLLRS VKLHRQEWRR HLENHGVQSA FGNSKSPEKM SAMDILQFPG 600
  601 LTVHHLAAAL PSESLARLED HRLAERLKIE GIYAPLIPQQ EAAIAEVQAD EELELPEDLD 660
  661 YTSLKLSTEA IYKLTQARPT TIGAASRLEG VTPAAVLRLL YHVKRQPYIH ASPGGGGGKG 720
  721 GKKKGPRNEG RPLPGSERPG GHDNIPSSTT EASTTTAKPT PRPNRPVKQN RFHDNMNRNG 780
  781 PMPDPPRNSQ RRRPNSGTAS GAGTGQRGIG NIQQQGATSG AQSIPQTRQV NSNGLTSELK 840
  841 ELFLNAHNDF RSRVHSPNAA NMVQMKWDDT LAEMAQGWSD QCVFTHGNPP NISPYSWVGQ 900
  901 NIWAGSGTGW DHYGMIEDWY NEVSDYNYQS NSCSGICGHY TQIVWAESTR VGCAITTCTT 960
  961 IQNLGWSPAT ILVCNYGEGG NYVGKKPYVS GPPCSQCPSN HPTCVDGKLC AAEGSNPNSG1020
 1021 SGGGNGNGSG GGNSGSNNGG NSGSGGSGGG NGGGNPEGSN GGSQPAPSGV GDNGDDRSGG1080
 1081 CGNVGGSDGG GNGVRGSDGG GTGVSGSVGD SIEVVAVGNQ GDKITLTITF MDIEVGPTCS1140
 1141 WDYLRIQTSP SDLGIKYCGM QTPPQITSDS GILQVTFHSD YTVPRGGFTA NYKIIANQQD1200
 1201 ECGGVVQKAN GAIKSPGWPA PYGAQQDCLW IIRVPPKKRV SIWFTAFDVE DHEICSHDHV1260
 1261 TLQLGDERVP MR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle