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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115499487
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSTTSVKLS PFDLMTALLN GKVSFDTSNT SDTNIPLAVF MENRELLMIL TTSVAVLIGC  60
   61 VVVLVWRRSS SAAKKAAESP VIVVPKKVTE DEVDDGRKKV TVFFGTQTGT AEGFAKALVE 120
  121 EAKARYEKAV FKVIDLDDYA AEDDEYEEKL KKESLAFFFL ATYGDGEPTD NAARFYKWFT 180
  181 EGEEKGEWLD KLQYAVFGLG NRQYEHFNKI AKVVDEKLVE QGAKRLVPVG MGDDDQCIED 240
  241 DFTAWKELVW PELDQLLRDE DDTSVATPYT AAVAEYRVVF HDKPETYDQD QLTNGHAVHD 300
  301 AQHPCRSNVA VKKELHSPLS DRSCTHLEFD ISNTGLSYET GDHVGVYVEN LSEVVDEAEK 360
  361 LIGLPPHTYF SVHADNEDGT PLGGASLPPP FPPCTLRKAL ASYADVLSSP KKSALLALAA 420
  421 HATDSTEADR LKFLASPAGK DEYAQWIVAS HRSLLEVMEA FPSAKPPLGV FFASVAPRLQ 480
  481 PRYYSISSSP RFAPNRIHVT CALVYEQTPS GRVHKGVCST WMKNAVPMTE SQDCSWAPIY 540
  541 VRTSNFRLPS DPKVPVIMIG PGTGLAPFRG FLQERLAQKE AGTELGTAIL FFGCRNRKVD 600
  601 FIYEDELNNF VETGALSELV TAFSREGATK EYVQHKMTQK ASDIWNLLSE GAYLYVCGDA 660
  661 KGMAKDVHRT LHTIVQEQGS LDSSKAELYV KNLQMAGRYL RDVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle