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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115628092, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAEYFSFER NFAIIRAGNA DDDRDMWAWQ AGWQWVWLAV AVVIGIAIFS RQRKTSQQAD  60
   61 KESRQNKSTS PVDPQASLDV TSIKIFYGTQ TGTAKNLAAQ LAKDIPDTVN TDVIDLKEFD 120
  121 PEKHVLLDQD EQTVCVYILS TYTDGEPPEG GAWFCRWLHE SVNDFRVPGT LLKGHQFAVF 180
  181 GLGNSLYQDH YNTVSKKVHQ WLIDLSARPL LPVGEGNGNV AASKHGGTEA DFAAWKSDFL 240
  241 QAVLKCDGSG DKSCSCNQNG TCQSSVIGQM SLEQNTVTPE RDGGGEEKAD DGLDSDQEDP 300
  301 DEMDVIDVED LGSVMNKMKN AKAMNGVKLG TEPKEMVTPT IRKNLTKQGY RIIGSHSGVK 360
  361 LCRWTKSMLR GRGGCYKHTF YGIESHRCME TTPSLACANK CVFCWRHHTN PVGTEWKWQM 420
  421 DDAESIVEGA LKNHYNLIKQ FKGVPGVKPE RMKEAMKAQH CALSLVGEPI MYPKINRLVE 480
  481 LLHKEQISTF LVTNAQFPDA IKNLLPVTQL YVSVDASTKE SLKKVDRPLF RDFWPRFLES 540
  541 LKALSDKGQR TVYRLTLVKA WNDEEIQSYA DLVQLGKPDF IEVKGVTYCG ESKASTLTMQ 600
  601 NIPWHEEVVH FVQKLMDLLP EYEIACEHEH SNCVLTANTK FKRDGEWWTW IDYSQFHALM 660
  661 AEYDASGGEK IFRAEDYMAK TPPWAVYGSK EQGFDPEETR FYRKGKKKDL GGC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle