YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115586318, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQSRPLQRR QQSGFTLIEI MVVVVILGIL AALVVPQVMS RPDQAKVTVA KGDIKAIAAA  60
   61 LDMYKLDNFA YPSTQQGLEA LVKKPTGNPQ PKNWNKDGYL KKLPVDPWGN PYQYLAPGTK 120
  121 GPFDLYSLGA DGKEGGSDND AEIGNWDN

Type	Start	End	Confidence
Cytoplasmic	1	13	0.90
Transmembrane Helix	14	35	0.90
Non-Cytoplasmic	36	148	0.96