YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116052519, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRMSLAALL SCLPLVAWAD NPVKLDTPVS GWRAGDGSAA NYRQVVNYPA SSVNVAADQA  60
   61 TTARIRGAIE SQPKERPATL VVNGVSMPLK VDADGSFDRP FAFPSGSNSV EVRNAAGQSR 120
  121 RVQFYHGGGG GEVPAKLRVL LSWDSDNTDL DLHLVTPDGD HVWYGNRSLA NGATLDVDVT 180
  181 TGYGPEIIAT PTPQKGPYLV YVNYFGGGYG SSEDGAEQAA QNLTTARITL VTEEGTPNEK 240
  241 QETFLVPMRK PGELTLVKRF SYP

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	263	0.99