YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116052894, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEKVVIVVH LLMALGLVGL ILVQHGKGAD AGASFGAGAS ATVFGSQGSA TFLSRITGIL  60
   61 AAVFFLTSLG LAYFAKEKSD ALQHIGLPDP AVLEQKQEKA PAADDVPVLQ EQSRPAESAG 120
  121 DVPAAPEQK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.84
Transmembrane Helix	7	26	0.92
Non-Cytoplasmic	27	51	0.82
Transmembrane Helix	52	75	0.86
Cytoplasmic	76	129	0.92