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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115548295
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTPYHHLHA PPYYPPLLPE EQPSDAGTPA SHRKPFKGFA AILASAIFLL SLVALIINQT  60
   61 QKPLPSQNNI VPTSKPTSFS NPEPRGVAEG VSAKSNSHLL RNIKGSYNWT NAMFTWQRTS 120
  121 FHFQPEKNWM NDPNGPLFYK GWYHLFYQYN PDSAVWGNIT WGHAASTDLI HWLYLPIAMV 180
  181 PDQWYDINGV WTGSATILPD GQIVMLYTGS TDKSVQVQNL AYPADPSDPL LLDWVKYPGN 240
  241 PVLVPPRHIG PKDFRDPTTA WAGPDGKWRL TIGSKIGKTG ISLVYQTTDF KTYELLDEYL 300
  301 HAVPGTGMWE CVDFYPVAIN GSVGLDTSAT GPGIKHVLKA SLDDTKVDHY AIGTYNPAND 360
  361 KWTPDNPEED VGIGLKWDYG RYYASKSFYD PYKKRRIVWG WINETDTESD DLEKGWASVQ 420
  421 TIPRTVLYDN KTGSNVVQWP VEEIESLRQN STVFEEVVVE PGSVVPLDIG VATQLDISAE 480
  481 FETELLGSGA MEEGYGCSGG AIDRSAMGPF GLLVNAHDSL SELTPIFFRS SNTTKGTNTY 540
  541 FCADETRSSL APDVFKQVRG SKVPVLQGEK LSMRILVDHS IVESFGQGGR TVITSRIYPT 600
  601 KAIYGAARLF LFNNATGVNV KATLKIWRLN SAFIHPFPLD QI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle