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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40472
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLGDENSS DPDSNKIDEF VKMLEGGRSI KRILVANNGL AAMKCLISIR QWLQNQFGTS  60
   61 GVVSFVCIAT EDEMRSASHY LKLADEIVMA PAGSNSKNFA NCDVIIRLAV EAQVDAVYVG 120
  121 WGHASENPEL CRRLELNNII FIGPSEKSII ASGDKIVSTI IAQSIGMPTV TWTGSGVKVE 180
  181 ECVDFEHYHE LRSKATIRNV KEGLEAIEKY GIGVPMMIKA SEGGGGKGIR KCENMDDFKR 240
  241 LFKEVELEFP NSPIFLMKCM DGARHVEIQI LGDKHGDVIA LSSRDCTIQR RCQKVIEEAP 300
  301 ASIVPGEVMQ KMKKDAIAFA NFVGYYSAGT VELLFIPTTN EYFFLELNPR LQVEHPCTES 360
  361 ICDVNVPALQ YQIAMGRKLK DIPCIKRFRE REATGNAGGV HCMAARVTCE DPNDRFLPST 420
  421 GTVRSLKFNS TSKAWAYFSL SDGSTVHEFA DSQIGHVFAR GRDRNEAIAN LKHGLQNLKI 480
  481 DATFPTQSDY LIDLLSLEKF KSNQYDTQWL DKRIASKEGQ KLTLSIDHLI AISAAAIGRS 540
  541 KIRRAFEKYE HQLKTGKIVL PIELSRCTEL DLLMNNLKYT LKVFEETSMK YHVRMGEQET 600
  601 TVKMLQYGSQ TLAIHQGKST DFCLEKSDDF YFIKIGGNKL KFPITDTNDA TCLRSPYTGK 660
  661 FLEYKVQPGE FVEVGQTYAQ IESMKMVFDV VTKIVPGRLI PIAKEGDLIN PGSILGRLEI 720
  721 DKQVQDQLPT SEKFSGKMKG WKMEEKSYFE RAKLILEGRG PLDYPVDSLI SGLFYSKECG 780
  781 DDATLSNEQT HELLERFLET EQYFDARDSF DESVQNMIKS NVDVLDFENV VDQIYSNSHL 840
  841 RTKEKLIFGV LSHISKSQVE PDFFIPILWK LFELNHLKEV NILTARILYR SIEHQDFTVK 900
  901 SCKIVTHKSG FSDCVASMKF ENDTDVSISN CIDQALIEFV NYSSEYSKLK FVANRIKIAN 960
  961 NSDNYIVSDI ENLILKRQKQ LEDAEVKEVF IQRAGGSLRF VNEFGVFRTE VLHNSDESSE1020
 1021 FSPPDKRDFK RSLARQNRTT YIYDFPRMFA WVASGSSKEP LDTWSSTVQV QELVIDDESS1080
 1081 ELRFISDLKE LEARATEGAN SCSVVAWLLN IHIDQKNMEF VLIGNDVTHQ VGSFAQPEHR1140
 1141 LFEMASKLAR EKQIPRINIS CNSGARIGLA RDVLDVLKVK LKSNGHDFDY LYVDATEKER1200
 1201 IGSQIVYKQH ENELRIKAVK GKKNEYIGVE NLMGSGAIGG ETSRAYREIP TYCYVTGRSV1260
 1261 GIGAYTARLA RRIIQHEKAH LILTGSAALN TLLGKKVYAS NNRLGGIEIM RSNGIAHATV1320
 1321 SSDLAGVAKL VHWMQYLPAT QSEFPFFRCF NDQSPSTELE AVGVTKDEMQ LDVKNLFEGF1380
 1381 NGKQGLFDTD SFDEIRSSWA ASMVTGRAKL NGLPVGVIAS QWKSYEKLLL ADESVENSEE1440
 1441 MITSKAGQVW YPESAFKTSQ AISDFNRESL PLIMIASLRG FSGGRKDMSD QVLTFGAHII1500
 1501 DELSQYQQPV IVYIPAGGEL RGGAWAVVDS NSAFKKGCVE FADMHDRWQR MDHVGAIRQV1560
 1561 VTLQKTRDVF WKILRREMIL IEMARRFQKA PIYPKPSLSE ALDWVQKKID GVDNLEQFYN1620
 1621 QFFSEAVSAE IEESKQKFDQ FIATWQDFFF IFLLKYFSIF LFYFIFLLND FLSRIPFFI

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