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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLCTK_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLNTRARA VFSAAVEGVH PDMVVRRGLE RHGDKLHVGG QSFTLTNNLY LVGFGKAVLG  60
   61 MAAEAERIVG DHLIKGVVSV PHGIQNTLRS HGKEKMLLES NSRITVMEGA KHNLPDTDAQ 120
  121 KSAECIRDLA SSLTEKDLLL VLISGGGSAL LPAPAPPMSL QEKQDVTRKL AAAGATIQEL 180
  181 NTVRRALSLL KGGGLAQCAS PAKVVALILS DVIGDPLDLI ASGPTVRSDS SPEEVWAILD 240
  241 NYKLSDSLPS SVKEVLSKSI SGQGSGVKNQ PQEVKDNVLN VVIGSNTIAL ECASRKASEL 300
  301 GLRPVILSPG VCGDVRSVAR LYGLLSSFAC SPGKEPPPEL AAEILKLGPE VGIESWDLCR 360
  361 TMNVLVGERK EGWGATCLLA GGEPTVKLSG KGRGGRNQEL AMRVGLELSQ GEVKSGAVFL 420
  421 SGGTDGQDGP TEAAGAVADG ELKEEAASQG LDTDSFLANN DSFTFFSKLS EGRRLLNPGL 480
  481 TGTNVMDVHV MLLPPSPQKD LQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle