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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|121583970, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYETQQYDSP PQYSPHYTAP SNMYTSRSFY SQRSEFGLYS SVPDAPHALG NPQHFYRWFS  60
   61 PPGIVKTMEG LTALLCFIIF ACVASTLVWD MPGYEGSIGG YIAGSGGYGV GSGYYGGTYG 120
  121 YQSSYMTPYS AKSAMISMAA LNFVVSLTFL VVSFSKMWCV RGKAFYLTVL VVDVVLAILQ 180
  181 CIIDIVFVIG VNPMAQSSQS ILYNPILMMC QSSLGTPSIS AGVNTGGFPG AYPSFNRYLY 240
  241 HYCFMDPEEA VALVCGLFVM IALIIAAYFA YKTRSKIWRH GKPNIYWEEP PILRTNRSQN 300
  301 SQDWRGTQYT PTVVLSEKAS PHLKAENSFT SYTEGTVSVY SEGGYKSNVY SENVKGFSPE 360
  361 PLYQNQWRSS SPVEEVEVQS RSVAEKAEVF EVEDVLCETG YTTAADSATE LHTYELEDTY 420
  421 SEITTDEQRR QYKKQFDVTF AVYKNLRAEL DDISDQMNEL SQELDTLHEE STKFQAVADE 480
  481 YNRLKDLKRS PEYKTKKLQC KKLRQELCRI KQLVKNYDQG YKKNMKTYVA DPQDFFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle