YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115528164
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQQEVRVKTS QQIEHKRIKE TRSGLFLYTL QKLFFTKRTT LFTRATCIEE KMLKVYLMLV  60
   61 LSAAAAVFAE SVRETETWVP LKNKAAIEDL ESSGNSQNED FEFTDLNQTD DEDGFDEDDE 120
  121 DDYDDMSGSG FADVIDDIED EFVNNQIPDD KGPFAPRPTV DENILVQNNE VFLRGAPNQD 180
  181 LDNHSNVLMT HAGDDSLFNN TEVLAAVIAG GAVGLVFAIL LIILLVHFVL RIKKKDEGSY 240
  241 DLGKTPIYKK APTTEIYA

Type	Start	End	Confidence
Non-Cytoplasmic	1	204	0.83
Transmembrane Helix	205	228	0.92
Cytoplasmic	229	258	0.96