YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115512760, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATHTLPLA SPGMARICLY GDLQRFGRRI DLRVKTGAEA IRALSTQLPA FRQKLNEGWY  60
   61 QVRIAGRDAG ENELSARLNE SLANGAVIHI VPRLAGAKSG GVFQAVLGAA LIAVAWWNPV 120
  121 GWLGAAAVSG MYAAGASMIL GGVAQMLAPK ARTPTATSTD NGKQNTYFSS LDNMVAQGNV 180
  181 LPVLYGEMRV GSRVVSQEIS TADEGDGGQV VVIGR

Type	Start	End	Confidence
Cytoplasmic	1	95	0.98
Transmembrane Helix	96	117	0.87
Non-Cytoplasmic	118	122	0.77
Transmembrane Helix	123	144	0.90
Cytoplasmic	145	215	0.97