YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115512111, gi...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHVIDLSYF VKTYRSKNKH ISVNFLRHFH RAGDLHLSGT TRCIYEDVIM KKCLTLLIAT  60
   61 VLSGISLTAY AAQPMSNLDS GQLRPAGTVS ATGASNLSDL EDKLAEKARE QGAKGYVINS 120
  121 AGGNDQMFGT AIIYK

Type	Start	End	Confidence
Cytoplasmic	1	52	0.78
Transmembrane Helix	53	72	0.76
Non-Cytoplasmic	73	135	0.96