YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218425684, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMSSFLHG RFLHPGVFSL CVLLPLLASA TTSHISFSYA ARQRMQNRAR LLKQYQTHLK  60
   61 KQASYIVEGN AKSRRALRQH NREQIKQHPE WFPAPLKASD RRWQALVENN HFLSSDHLHN 120
  121 ITEVAIHRLE QQLGKPYIWG GTRPDKGFDC SGLVFYAYNK ILEAKLPRTA NEMYHYRRAT 180
  181 IVANNDLRRG DLLFFHIHSR EIADHMGVYL GDGQFIESPR TGETIRVSRL AEPFWQDHFL 240
  241 GARRILTEET IL

Type	Start	End	Confidence
Signal Peptide	1	40	0.86
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	252	0.99