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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117623162, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSPDSMESN NGEAKIQKVK NWSPVWIFPI VTALIGAWVL FYHYSHQGPE VTLITANAEG  60
   61 IEGGKTTIKS RSVDVGVVES ATLADDLTHV EIKARLNSGM EKLLHKDTVF WVVKPQIGRE 120
  121 GISGLGTLLS GVYIELQPGA KGSKMDKYDL LDSPPLAPPD AKGIRVLLDS KKAGQLSPGD 180
  181 PVLFRGYRVG SVETSTFDTQ KRNISYQLFI NAPYDRLVTS NVRFWKDSGI AVDLTSAGMR 240
  241 VEMGSLTTLL SGGVSFDVPE GLDLGQPVAP KTAFVLYDDQ KSIQDSLYTD HIDYLMFFKD 300
  301 SVRGLQPGAP VEFRGIRLGT VSKVPFFAPN MRQTFNDDYR IPVLIRIEPE RLKMQLGENA 360
  361 DVVEHLGELL KRGLRGSLKT GNLVTGALYV DLDFYPNTPA ITGIREFNGY QIIPTVSGGL 420
  421 AQIQQRLMEA LDKINKLPLN PMIEQATSTL SESQRTMKNL QTTLDSMNKI LASQSMQQLP 480
  481 TDMQSTLREL NRSMQGFQPG SAAYNKMVAD MQRLDQVLRE LQPVLKTLNE KSNALVFEAK 540
  541 DKKDPEPKRA KQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle