YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115511813, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEPVLALPG CGLDLCVHCC LSDGGDVMSH SNASSGASHG SVKTYMTGFI LSIILTVIPF  60
   61 WMVMTGAASP AVILGTILAM AVVQILVHLV CFLHMNTKSD EGWNMTAFVF TVLIIAILVV 120
  121 GSIWIMWNLN YNMMMH

Type	Start	End	Confidence
Cytoplasmic	1	43	0.92
Transmembrane Helix	44	63	0.94
Non-Cytoplasmic	64	70	0.71
Transmembrane Helix	71	93	0.92
Cytoplasmic	94	104	0.80
Transmembrane Helix	105	127	0.92
Non-Cytoplasmic	128	136	0.91