YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115515460, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRWFFQQTH NNKFQLTDYL GKNMRKITQA LSAVCLLFAL NSSAVALASS PSPLNPGTNV  60
   61 AKLAEQAPIH WVSVAQIENS LAGRPPMAVG FDIDDTVLFS SPGFWRGKKT FSPESEDYLK 120
  121 NPVFWEKMNN GWDEFSIPKE VARQLIDMHV RRGDAIFFVT GRSPTKTETV SKTLADNFHI 180
  181 PATNMNPVIF AGDKPGQNTK SQWLQDKNIR IFYGDSDNDI TAARDVGARG IRILRASNST 240
  241 YKPLPQAGAF GEEVIVNSEY

Type	Start	End	Confidence
Signal Peptide	1	48	0.92
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	260	0.99