YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115334954
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPIMFLTL LFSAASLIAI SSANFNQDFQ ITWGDGRAKI LNNGELLTLS LDKASGSGFQ  60
   61 SQNEYLFGKI DMQLKLVAGN SAGTVTAYYL SSKGSTWDEI DFEFLGNLTG DPYTLHTNVF 120
  121 SQGKGNREQQ FHLWFDPTAD FHTYSILWNP NRIVFSVDGT PIREFKNWES NGVPFPKDQP 180
  181 MRIYSSLWNA DDWATRGGLV KTDWTKAPFT ASYKNFKAEA CVLSGGQSSC SPSAPAGSRN 240
  241 SWLSEEMDSV SQERLKWVQK NYMIYNYCTD TRRFPQGLPT ECKLP

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	285	0.99