YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78191065
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSVALFWV VSPNSEVSNG TGFLDSLREG NRVFVSSRFL ARDRNLMWNG RIKKGRRQRW  60
   61 NFGSLNADSR YACFGGSRTE NGSSFSVQSS LVASPSGEMT VSSEKKVYDV VLKQAALVKR 120
  121 QLRSTDELEV KPDIVVPGNL GLLSEAYDRC GEVCAEYAKT FYLGTKLMTP ERRRAIWAIY 180
  181 VWCRRTDELV DGPNASHITP QALDRWEARL EDIFSGQPFD MLDAALSDTV SRFPVDIQPF 240
  241 RDMIEGMRMD LWKSRYNNFD ELYLYCYYVA GTVGLMSVPV MGIAPESKAT TESVYNAALA 300
  301 LGLANQLTNI LRDVGEDARR GRVYLPQDEL AQAGLSDEDI FAGRVTDKWR NFMKKQIQRA 360
  361 RKFFDESEKG VTELDSASRW PVLAALLLYR KILDEIEAND YNNFTRRAYV SKPKKLLTLP 420
  421 IAYAKSLVPP NRTSTPLAKT

Type	Start	End	Confidence
Signal Peptide	1	20	0.65
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	440	0.96