YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78191045
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTTTPSFQ IWRRFIAASP IICRSSLSLV SVSKSPLLKS HRRAASLRCY SSSSATRMAD  60
   61 AVSDANMDAV QRRLMFEDEC ILVDEDDRVV GHDTKYNCHL MEKIEAENLL HRAFSVFLFN 120
  121 SKYELLLQQR SATKVTFPLV WTNTCCSHPL YRDSELIEEN ALGVRNAAQR KLLDELGIPA 180
  181 EDVPVDQFTP LGRILYKAPS DGKWGEHELD YLLFTVREVN MKPNPDEVAD VKYVNREQLK 240
  241 ELLRKADAGE GGLKLSPWFR LVVDNFLFKW WDHLEKGTLE EVIDMKTIRK LT

Type	Start	End	Confidence
Signal Peptide	1	28	0.54
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	292	0.95